← All skills

pybedtools

80 / 100 · Low risk

Fine to try. Some of what it can do is expected: a coding skill usually runs build and test commands.

By stanfish06/skillquarium (GitHub) · coding · 12 stars · scanned at commit f748ea9

Python genomic interval arithmetic with BEDTools, complementing pysam, polars, and query for downstream tables. Use when intersecting, merging, subtracting, shuffling, finding closest features, computing coverage, or converting BED, GFF, GTF, VCF, BAM, and pandas DataFrames into interval operations.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'pybedtools' ] || [ -L ~/.agents/skills/'pybedtools' ]; then echo 'A skill folder named pybedtools already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/stanfish06/skillquarium' "$d" && git -C "$d" checkout --quiet 'f748ea91aa51ce8fc42c27c809dba73a8377b1d5' -- 'skills/pybedtools' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/pybedtools' ~/.agents/skills/'pybedtools' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'pybedtools' ~/.claude/skills/'pybedtools' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

Badge for your README

The badge for stanfish06/skillquarium shows the score of its lowest-scoring skill.

[![SkillTrust](https://zalavijaysinh.github.io/skilltrust/badges/stanfish06/skillquarium.svg)](https://zalavijaysinh.github.io/skilltrust/repos/stanfish06/skillquarium/)

Score history