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ngs-scrna-seq

95 / 100 · Low risk

Fine to try.

By stanfish06/skillquarium (GitHub) · other · 12 stars · scanned at commit ced6c96

Route single-cell or single-nucleus RNA-seq FASTQs to public count-generation workflows and defer post-count matrix QC, annotation, clustering, and UMAP analysis to the embedded scrna-seq-qc skill.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'ngs-scrna-seq' ] || [ -L ~/.agents/skills/'ngs-scrna-seq' ]; then echo 'A skill folder named ngs-scrna-seq already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/stanfish06/skillquarium' "$d" && git -C "$d" checkout --quiet 'ced6c96bd67acccbf0280a5071e59a523c118c66' -- 'skills/ngs-scrna-seq' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/ngs-scrna-seq' ~/.agents/skills/'ngs-scrna-seq' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'ngs-scrna-seq' ~/.claude/skills/'ngs-scrna-seq' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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