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locus-to-gene-mapper-skill

92 / 100 · Low risk

Fine to try. Some of what it can do is expected: a coding skill usually runs build and test commands.

By stanfish06/skillquarium (GitHub) · coding · 12 stars · scanned at commit ced6c96

Map GWAS loci to ranked candidate genes using a deterministic multi-skill chain (EFO -> GWAS -> coordinates -> Open Targets L2G/coloc -> eQTL -> burden/coding context), with reproducible tables and optional figures. Use when a user provides a trait/EFO term and/or lead variants and needs locus-to-gene prioritization for downstream biology decisions.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'locus-to-gene-mapper-skill' ] || [ -L ~/.agents/skills/'locus-to-gene-mapper-skill' ]; then echo 'A skill folder named locus-to-gene-mapper-skill already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/stanfish06/skillquarium' "$d" && git -C "$d" checkout --quiet 'ced6c96bd67acccbf0280a5071e59a523c118c66' -- 'skills/locus-to-gene-mapper-skill' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/locus-to-gene-mapper-skill' ~/.agents/skills/'locus-to-gene-mapper-skill' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'locus-to-gene-mapper-skill' ~/.claude/skills/'locus-to-gene-mapper-skill' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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