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genomics-workflow-acceleration

100 / 100 · Low risk

Fine to try.

By stanfish06/skillquarium (GitHub) · productivity · 12 stars · scanned at commit f748ea9

Use when accelerating existing genomics workflows with NVIDIA Parabricks, improving runtime or price/performance, converting pipeline steps to GPUs, or comparing CPU and GPU workflow outputs. Adds optional GPU steps in-place with runtime toggles (default off). Do NOT use for individual pbrun command routing — use parabricks.

Works with any agent that supports SKILL.md skills.

Partially scanned — some files couldn't be read; we'll retry on the next scan

What this skill can do

We found nothing in the files we read that matches our rules. That does not prove the skill is safe: see the limits of static scanning.

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'genomics-workflow-acceleration' ] || [ -L ~/.agents/skills/'genomics-workflow-acceleration' ]; then echo 'A skill folder named genomics-workflow-acceleration already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/stanfish06/skillquarium' "$d" && git -C "$d" checkout --quiet 'f748ea91aa51ce8fc42c27c809dba73a8377b1d5' -- 'skills/genomics-workflow-acceleration' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/genomics-workflow-acceleration' ~/.agents/skills/'genomics-workflow-acceleration' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'genomics-workflow-acceleration' ~/.claude/skills/'genomics-workflow-acceleration' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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