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clinical-variant-reporter

75 / 100 · Review before installing

Check before installing.

By stanfish06/skillquarium (GitHub) · other · 12 stars · scanned at commit ced6c96

Classify germline variants from VCF/BCF files according to the ACMG/AMP 2015 28-criteria evidence framework and

Works with any agent that supports SKILL.md skills.

What this skill can do

Safer alternatives

Low-risk skills in the same category (other) that look related. Check that one does what you need.

• 80 Low riskbio-clinical-databases-acmg-classificationlilinji/GeneTind-Life-Skills · 17 stars
• 85 Low riskbio-clinical-databases-variant-prioritizationlilinji/GeneTind-Life-Skills · 17 stars
• 100 Low risktooluniverse-structural-variant-analysislilinji/GeneTind-Life-Skills · 17 stars

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'clinical-variant-reporter' ] || [ -L ~/.agents/skills/'clinical-variant-reporter' ]; then echo 'A skill folder named clinical-variant-reporter already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/stanfish06/skillquarium' "$d" && git -C "$d" checkout --quiet 'ced6c96bd67acccbf0280a5071e59a523c118c66' -- 'skills/clinical-variant-reporter' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/clinical-variant-reporter' ~/.agents/skills/'clinical-variant-reporter' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'clinical-variant-reporter' ~/.claude/skills/'clinical-variant-reporter' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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