← All skills

waypoint-bio

80 / 100 · Low risk

Fine to try.

By sharkrebel/everything-everywhere-for-antigravity (GitHub) · data · 89 stars · scanned at commit 71bf78c

Use when working with Outpost Bio's open microbiome foundation models - the Waypoint checkpoints (Waypoint-6m, Waypoint-45m, Waypoint-170m), the Atlas pretraining corpus, the Compass eight-task benchmark, or the `waypoint` CLI from the `waypoint-bio` package. Covers embedding microbiome samples, fine-tuning on taxonomic abundance data, benchmarking a checkpoint on Compass, pretraining a GPT-2 model on taxonomic abundance profiles, and converting MetaPhlAn, Kraken2, QIIME 2, or MGnify abundance …

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'waypoint-bio' ] || [ -L ~/.agents/skills/'waypoint-bio' ]; then echo 'A skill folder named waypoint-bio already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/sharkrebel/everything-everywhere-for-antigravity' "$d" && git -C "$d" checkout --quiet '71bf78cfb929edcf8972b707085c40cc0cf23bae' -- 'plugins/scientific-agent-skills/skills/waypoint-bio' && mkdir -p ~/.agents/skills && cp -R "$d"/'plugins/scientific-agent-skills/skills/waypoint-bio' ~/.agents/skills/'waypoint-bio' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'waypoint-bio' ~/.claude/skills/'waypoint-bio' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

Badge for your README

The badge for sharkrebel/everything-everywhere-for-antigravity shows the score of its lowest-scoring skill.

[![SkillTrust](https://zalavijaysinh.github.io/skilltrust/badges/sharkrebel/everything-everywhere-for-antigravity.svg)](https://zalavijaysinh.github.io/skilltrust/repos/sharkrebel/everything-everywhere-for-antigravity/)

Score history