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alterlab-gget
80 / 100 · Low risk
Fine to try. Some of what it can do is expected: a coding skill usually runs build and test commands.
By roohe/agentic-super-skills (GitHub) · coding · 10 stars · scanned at commit f483e54
Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST searches, AlphaFold structures, enrichment analysis. Best for interactive exploration, simple queries. For batch processing or advanced BLAST use biopython; for multi-database Python workflows use bioservices. Part of the AlterLab Academic Skills suite.
Works with any agent that supports SKILL.md skills.
What this skill can do
Downloads and installs other software
The author does not mention this.
Found in 5 places.
Show 2 more
Runs commands on your computer
The author does not mention this. Expected for a coding skill.
Found in 29 places.
Show 17 more
- skills_library/alterlab-gget/SKILL.md, line 106
gget search -s human gaba gamma-aminobutyric - skills_library/alterlab-gget/SKILL.md, line 132
gget info ENSG00000034713 ENSG00000104853 ENSG00000170296 - skills_library/alterlab-gget/SKILL.md, line 157
gget seq ENSG00000034713 ENSG00000104853 - skills_library/alterlab-gget/SKILL.md, line 188
gget blast MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSR - skills_library/alterlab-gget/SKILL.md, line 213
gget blat ATCGATCGATCGATCG - skills_library/alterlab-gget/SKILL.md, line 237
gget muscle sequences.fasta -o aligned.afa - skills_library/alterlab-gget/SKILL.md, line 265
gget diamond GGETISAWESQME -ref reference.fasta --threads 4 - skills_library/alterlab-gget/SKILL.md, line 292
gget pdb 7S7U -o 7S7U.pdb - skills_library/alterlab-gget/SKILL.md, line 310
uv pip install openmm - skills_library/alterlab-gget/SKILL.md, line 329
gget alphafold MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSR - skills_library/alterlab-gget/SKILL.md, line 349
gget setup elm - skills_library/alterlab-gget/SKILL.md, line 366
gget elm LIAQSIGQASFV -o results - skills_library/alterlab-gget/SKILL.md, line 396
gget archs4 ACE2 - skills_library/alterlab-gget/SKILL.md, line 413
gget setup cellxgene - skills_library/alterlab-gget/SKILL.md, line 431
gget cellxgene --gene ACE2 ABCA1 --tissue lung --cell_type "mucus secreting cell" -o lung_data.h5ad - skills_library/alterlab-gget/SKILL.md, line 464
gget enrichr -db ontology ACE2 AGT AGTR1 - skills_library/alterlab-gget/SKILL.md, line 490
gget bgee ENSG00000169194
and 9 more places
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'alterlab-gget' ] || [ -L ~/.agents/skills/'alterlab-gget' ]; then echo 'A skill folder named alterlab-gget already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/roohe/agentic-super-skills' "$d" && git -C "$d" checkout --quiet 'f483e54f3ad5f202a77d45f2e57f8d970b71195f' -- 'skills_library/alterlab-gget' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills_library/alterlab-gget' ~/.agents/skills/'alterlab-gget' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'alterlab-gget' ~/.claude/skills/'alterlab-gget' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
The badge for roohe/agentic-super-skills shows the score of its lowest-scoring skill.

[](https://zalavijaysinh.github.io/skilltrust/repos/roohe/agentic-super-skills/)
Score history
| Date | Version | Score |
|---|
| 2026-11-08 | f483e54 | 80 |