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metabolomics-workbench-database
95 / 100 · Low risk
Fine to try.
By Microck/ordinary-claude-skills (GitHub) · coding · 413 stars · scanned at commit 1056d29
Access NIH Metabolomics Workbench via REST API (4,200+ studies). Query metabolites, RefMet nomenclature, MS/NMR data, m/z searches, study metadata, for metabolomics and biomarker discovery.
Works with any agent that supports SKILL.md skills.
What this skill can do
Sends data to these websites: www.metabolomicsworkbench.org
The author does not mention this.
Found in 28 places.
Show 17 more
- skills_all/metabolomics-workbench-database/SKILL.md, line 56
response = requests.get('https://www.metabolomicsworkbench.org/rest/study/study_id/ST/available/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 59
response = requests.get('https://www.metabolomicsworkbench.org/rest/study/study_id/ST000001/summary/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 62
response = requests.get('https://www.metabolomicsworkbench.org/rest/study/study_id/ST000001/data/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 65
response = requests.get('https://www.metabolomicsworkbench.org/rest/study/refmet_name/Tyrosine/summary/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 81
response = requests.get('https://www.metabolomicsworkbench.org/rest/refmet/match/citrate/name/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 84
response = requests.get('https://www.metabolomicsworkbench.org/rest/refmet/formula/C12H24O2/all/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 87
response = requests.get('https://www.metabolomicsworkbench.org/rest/refmet/main_class/Fatty%20Acids/all/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 90
response = requests.get('https://www.metabolomicsworkbench.org/rest/refmet/all/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 106
response = requests.get('https://www.metabolomicsworkbench.org/rest/moverz/MB/635.52/M+H/0.5/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 109
response = requests.get('https://www.metabolomicsworkbench.org/rest/moverz/exactmass/PC(34:1)/M+H/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 112
response = requests.get('https://www.metabolomicsworkbench.org/rest/moverz/REFMET/200.15/M-H/0.3/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 129
response = requests.get('https://www.metabolomicsworkbench.org/rest/metstat/LCMS;POSITIVE;HILIC;Human;Blood;Diabetes/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 132
response = requests.get('https://www.metabolomicsworkbench.org/rest/metstat/;;;Human;Blood;;;Tyrosine/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 135
response = requests.get('https://www.metabolomicsworkbench.org/rest/metstat/GCMS;;;;;;/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 151
response = requests.get('https://www.metabolomicsworkbench.org/rest/gene/gene_symbol/ACACA/all/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 154
response = requests.get('https://www.metabolomicsworkbench.org/rest/protein/uniprot_id/Q13085/all/json') - skills_all/metabolomics-workbench-database/SKILL.md, line 165
response = requests.get('https://www.metabolomicsworkbench.org/rest/refmet/match/glucose/name/json')
and 8 more places
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'metabolomics-workbench-database' ] || [ -L ~/.agents/skills/'metabolomics-workbench-database' ]; then echo 'A skill folder named metabolomics-workbench-database already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/Microck/ordinary-claude-skills' "$d" && git -C "$d" checkout --quiet '1056d293d41a3a3b86518d8ab6ec0a79091ccedb' -- 'skills_all/metabolomics-workbench-database' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills_all/metabolomics-workbench-database' ~/.agents/skills/'metabolomics-workbench-database' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'metabolomics-workbench-database' ~/.claude/skills/'metabolomics-workbench-database' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
The badge for Microck/ordinary-claude-skills shows the score of its lowest-scoring skill.
[](https://zalavijaysinh.github.io/skilltrust/repos/Microck/ordinary-claude-skills/)
Score history
| Date | Version | Score |
|---|
| 2026-11-07 | 1056d29 | 100 |
Also found in
Identical copies of this skill exist at:
- Activer007/ordinary-claude-skills/skills_all/metabolomics-workbench-database
- Activer007/ordinary-claude-skills/skills_categorized/astronomy-physics/metabolomics-workbench-database
- Activer007/ordinary-claude-skills/skills_categorized/lab-tools/metabolomics-workbench-database
- Microck/ordinary-claude-skills/skills_categorized/astronomy-physics/metabolomics-workbench-database
- Microck/ordinary-claude-skills/skills_categorized/lab-tools/metabolomics-workbench-database