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alphagenome-variant-effects

85 / 100 · Low risk

Fine to try.

By mdbabumiamssm/LLMs-Universal-Life-Science-and-Clinical-Skills- (GitHub) · coding · 36 stars · scanned at commit fde6cd1

Use Google DeepMind AlphaGenome to predict tissue-aware regulatory effects of DNA sequence variants across expression, splicing, chromatin, and contact-map outputs. Use when prioritizing noncoding variants, comparing reference and alternate alleles, visualizing predicted regulatory changes, or designing focused AlphaGenome API analyses.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'alphagenome-variant-effects' ] || [ -L ~/.agents/skills/'alphagenome-variant-effects' ]; then echo 'A skill folder named alphagenome-variant-effects already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/mdbabumiamssm/LLMs-Universal-Life-Science-and-Clinical-Skills-' "$d" && git -C "$d" checkout --quiet 'fde6cd1025d8a9300ad783b3d6696fa708a5cdb0' -- 'Skills/Genomics/alphagenome-variant-effects' && mkdir -p ~/.agents/skills && cp -R "$d"/'Skills/Genomics/alphagenome-variant-effects' ~/.agents/skills/'alphagenome-variant-effects' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'alphagenome-variant-effects' ~/.claude/skills/'alphagenome-variant-effects' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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