← All skills

bio-temporal-genomics-trajectory-modeling

85 / 100 · Low risk

Fine to try.

By lilinji/GeneTind-Life-Skills (GitHub) · coding · 17 stars · scanned at commit 908229c

Models continuous temporal trajectories from BULK or time-resolved omics where the x-axis is measured experimental time: penalized GAMs (mgcv) for smooth trends and changepoint detection (segmented, ruptures) for abrupt regime shifts. Use when deciding between a smooth GAM and a changepoint model; choosing the GAM distribution (nb() plus a library-size offset for raw counts vs Gaussian on vst/log-CPM); setting the basis-dimension ceiling k below the number of timepoints and letting REML pick wi…

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-temporal-genomics-trajectory-modeling' ] || [ -L ~/.agents/skills/'bio-temporal-genomics-trajectory-modeling' ]; then echo 'A skill folder named bio-temporal-genomics-trajectory-modeling already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lilinji/GeneTind-Life-Skills' "$d" && git -C "$d" checkout --quiet '908229c955510a1841b216e8bf58f6b22818d4dc' -- 'skills/bio-temporal-genomics-trajectory-modeling' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/bio-temporal-genomics-trajectory-modeling' ~/.agents/skills/'bio-temporal-genomics-trajectory-modeling' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-temporal-genomics-trajectory-modeling' ~/.claude/skills/'bio-temporal-genomics-trajectory-modeling' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

Badge for your README

The badge for lilinji/GeneTind-Life-Skills shows the score of its lowest-scoring skill.

[![SkillTrust](https://zalavijaysinh.github.io/skilltrust/badges/lilinji/GeneTind-Life-Skills.svg)](https://zalavijaysinh.github.io/skilltrust/repos/lilinji/GeneTind-Life-Skills/)

Score history