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bio-temporal-genomics-temporal-clustering

85 / 100 · Low risk

Fine to try.

By lilinji/GeneTind-Life-Skills (GitHub) · other · 17 stars · scanned at commit 908229c

Clusters temporally variable genes by expression-profile SHAPE (not significance) using Mfuzz fuzzy c-means, TCseq, DEGreport degPatterns, and tslearn DTW/soft-DTW. Use when grouping pre-selected time-course genes into shared trajectory programs (co-expression modules), choosing between soft vs hard clustering, picking k, selecting a distance metric (Euclidean/correlation/DTW), or interpreting clusters with per-cluster enrichment. Requires temporally variable genes selected FIRST (differential-…

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-temporal-genomics-temporal-clustering' ] || [ -L ~/.agents/skills/'bio-temporal-genomics-temporal-clustering' ]; then echo 'A skill folder named bio-temporal-genomics-temporal-clustering already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lilinji/GeneTind-Life-Skills' "$d" && git -C "$d" checkout --quiet '908229c955510a1841b216e8bf58f6b22818d4dc' -- 'skills/bio-temporal-genomics-temporal-clustering' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/bio-temporal-genomics-temporal-clustering' ~/.agents/skills/'bio-temporal-genomics-temporal-clustering' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-temporal-genomics-temporal-clustering' ~/.claude/skills/'bio-temporal-genomics-temporal-clustering' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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