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bio-tcr-bcr-analysis-specificity-annotation

85 / 100 · Low risk

Fine to try.

By lilinji/GeneTind-Life-Skills (GitHub) · data · 17 stars · scanned at commit 908229c

Maps TCR/BCR receptor sequences toward candidate antigen specificity and clusters repertoires by shared-specificity signal, while enforcing that a database match or a cluster label is a HYPOTHESIS, not a specificity call. Use when deciding among database annotation (VDJdb/McPAS/IEDB+TCRMatch, requiring V-gene and HLA concordance plus a confidence score) versus sequence clustering (tcrdist3 meta-clonotypes, GLIPH2, GIANA, clusTCR, which find enrichment not per-receptor labels) versus generation-…

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-tcr-bcr-analysis-specificity-annotation' ] || [ -L ~/.agents/skills/'bio-tcr-bcr-analysis-specificity-annotation' ]; then echo 'A skill folder named bio-tcr-bcr-analysis-specificity-annotation already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lilinji/GeneTind-Life-Skills' "$d" && git -C "$d" checkout --quiet '908229c955510a1841b216e8bf58f6b22818d4dc' -- 'skills/bio-tcr-bcr-analysis-specificity-annotation' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/bio-tcr-bcr-analysis-specificity-annotation' ~/.agents/skills/'bio-tcr-bcr-analysis-specificity-annotation' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-tcr-bcr-analysis-specificity-annotation' ~/.claude/skills/'bio-tcr-bcr-analysis-specificity-annotation' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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