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bio-proteomics-quantification

92 / 100 · Low risk

Fine to try.

By lilinji/GeneTind-Life-Skills (GitHub) · coding · 17 stars · scanned at commit 908229c

Quantifies protein abundance from mass spectrometry using label-free (LFQ/MaxLFQ, DIA fragment-level), isobaric (TMT/iTRAQ reporter ions, MS2 vs SPS-MS3), and metabolic (SILAC) approaches, including peptide-to-protein summarization (Tukey median polish, MaxLFQ, msqrob), sample-loading and IRS cross-plex normalization, and isotopic impurity correction. Use when turning peptide/PSM/reporter signal into a protein-by-sample abundance matrix for downstream analysis. Statistical testing of that matri…

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-proteomics-quantification' ] || [ -L ~/.agents/skills/'bio-proteomics-quantification' ]; then echo 'A skill folder named bio-proteomics-quantification already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lilinji/GeneTind-Life-Skills' "$d" && git -C "$d" checkout --quiet '908229c955510a1841b216e8bf58f6b22818d4dc' -- 'skills/bio-proteomics-quantification' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/bio-proteomics-quantification' ~/.agents/skills/'bio-proteomics-quantification' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-proteomics-quantification' ~/.claude/skills/'bio-proteomics-quantification' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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