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bio-proteomics-protein-inference

85 / 100 · Low risk

Fine to try.

By lilinji/GeneTind-Life-Skills (GitHub) · other · 17 stars · scanned at commit 908229c

Groups proteins from peptide identifications and controls protein-level FDR, framing inference as a chosen explanation (parsimony or a probability model) of underdetermined peptide evidence rather than a measurement. Reports protein GROUPS (proteins indistinguishable by observed peptides) with a leading protein, not flat lists. Covers shared-vs-unique peptides, indistinguishable/subsumable proteins, parsimony vs probabilistic (ProteinProphet, EPIFANY) vs razor inference, picked-protein and pick…

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-proteomics-protein-inference' ] || [ -L ~/.agents/skills/'bio-proteomics-protein-inference' ]; then echo 'A skill folder named bio-proteomics-protein-inference already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lilinji/GeneTind-Life-Skills' "$d" && git -C "$d" checkout --quiet '908229c955510a1841b216e8bf58f6b22818d4dc' -- 'skills/bio-proteomics-protein-inference' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/bio-proteomics-protein-inference' ~/.agents/skills/'bio-proteomics-protein-inference' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-proteomics-protein-inference' ~/.claude/skills/'bio-proteomics-protein-inference' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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