← All skills

bio-methylation-dmr-detection

95 / 100 · Low risk

Fine to try. Some of what it can do is expected: a coding skill usually runs build and test commands.

By lilinji/GeneTind-Life-Skills (GitHub) · coding · 17 stars · scanned at commit 908229c

Detects differentially methylated regions (DMRs) from short-read bisulfite (WGBS/RRBS), array, and long-read methylation count tables using dmrseq (permutation region-FDR over the region selection), DSS callDMR (beta-binomial), methylKit tiles, bsseq BSmooth, DMRcate Gaussian-kernel smoothing, metilene, and comb-p. Covers why a DMR is DEFINED by arbitrary thresholds (min-CpGs, max-gap, delta-beta, q) and a smoothing bandwidth, why selecting extreme runs of CpGs then testing them on the same dat…

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-methylation-dmr-detection' ] || [ -L ~/.agents/skills/'bio-methylation-dmr-detection' ]; then echo 'A skill folder named bio-methylation-dmr-detection already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lilinji/GeneTind-Life-Skills' "$d" && git -C "$d" checkout --quiet '908229c955510a1841b216e8bf58f6b22818d4dc' -- 'skills/bio-methylation-dmr-detection' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/bio-methylation-dmr-detection' ~/.agents/skills/'bio-methylation-dmr-detection' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-methylation-dmr-detection' ~/.claude/skills/'bio-methylation-dmr-detection' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

Badge for your README

The badge for lilinji/GeneTind-Life-Skills shows the score of its lowest-scoring skill.

[![SkillTrust](https://zalavijaysinh.github.io/skilltrust/badges/lilinji/GeneTind-Life-Skills.svg)](https://zalavijaysinh.github.io/skilltrust/repos/lilinji/GeneTind-Life-Skills/)

Score history