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bio-clinical-databases-pharmacogenomics

75 / 100 · Review before installing

Check before installing.

By lilinji/GeneTind-Life-Skills (GitHub) · other · 17 stars · scanned at commit 908229c

Queries PharmGKB / CPIC / DPWG for drug-gene interactions; calls CYP2D6/CYP2C9/CYP2C19/DPYD/TPMT/NUDT15/UGT1A1/SLCO1B1 star alleles and phenotype with PharmCAT, Cyrius (CYP2D6 structural variants), Aldy, Stargazer; applies Caudle 2020 activity-score translation. Use when implementing pharmacogenomic-guided prescribing, applying CPIC vs DPWG guidance, screening HLA risk alleles for ICI / antiepileptics / abacavir, or interpreting compound TPMT+NUDT15 thiopurine risk.

Works with any agent that supports SKILL.md skills.

What this skill can do

Safer alternatives

Low-risk skills in the same category (other) that look related. Check that one does what you need.

• 95 Low riskvariant-pharmacogenomicsInternScience/DrClaw · 172 stars
• 100 Low riskpharmacogenomicsexon-research/genomi · 492 stars
• 85 Low riskbio-clinical-databases-gnomad-frequenciesdiegosouzapw/awesome-omni-skill · 66 stars

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-clinical-databases-pharmacogenomics' ] || [ -L ~/.agents/skills/'bio-clinical-databases-pharmacogenomics' ]; then echo 'A skill folder named bio-clinical-databases-pharmacogenomics already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lilinji/GeneTind-Life-Skills' "$d" && git -C "$d" checkout --quiet '908229c955510a1841b216e8bf58f6b22818d4dc' -- 'skills/bio-clinical-databases-pharmacogenomics' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/bio-clinical-databases-pharmacogenomics' ~/.agents/skills/'bio-clinical-databases-pharmacogenomics' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-clinical-databases-pharmacogenomics' ~/.claude/skills/'bio-clinical-databases-pharmacogenomics' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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