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etetoolkit

80 / 100 · Low risk

Fine to try.

By lifangda/claude-plugins (GitHub) · data · 43 stars · scanned at commit 76d90e8

Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'etetoolkit' ] || [ -L ~/.agents/skills/'etetoolkit' ]; then echo 'A skill folder named etetoolkit already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lifangda/claude-plugins' "$d" && git -C "$d" checkout --quiet '76d90e8304f792a3c98ddd4172ec7ec59b1e656f' -- 'cli-tool/skills-library/scientific-computing/other-packages/etetoolkit' && mkdir -p ~/.agents/skills && cp -R "$d"/'cli-tool/skills-library/scientific-computing/other-packages/etetoolkit' ~/.agents/skills/'etetoolkit' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'etetoolkit' ~/.claude/skills/'etetoolkit' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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