pyopenms
80 / 100 · Low risk
Fine to try.
Complete mass spectrometry analysis platform. Use for proteomics workflows feature detection, peptide identification, protein quantification, and complex LC-MS/MS pipelines. Supports extensive file formats and algorithms. Best for proteomics, comprehensive MS data processing. For simple spectral comparison and metabolite ID use matchms.
What this skill can do
Downloads and installs other software
Runs commands on your computer
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'pyopenms' ] || [ -L ~/.agents/skills/'pyopenms' ]; then echo 'A skill folder named pyopenms already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lamm-mit/scienceclaw' "$d" && git -C "$d" checkout --quiet '894598cd3a90891a077c254566276bd379038bad' -- 'skills/pyopenms' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/pyopenms' ~/.agents/skills/'pyopenms' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'pyopenms' ~/.claude/skills/'pyopenms' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
[](https://zalavijaysinh.github.io/skilltrust/repos/lamm-mit/scienceclaw/)
Score history
| Date | Version | Score |
|---|---|---|
| 2026-11-13 | 894598c | 80 |