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gwas-database
77 / 100 · Review before installing
Check before installing. Some of what it can do is expected: a data skill usually connects to databases or online services with your credentials.
By lamm-mit/scienceclaw (GitHub) · data · 251 stars · scanned at commit 894598c
Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.
Works with any agent that supports SKILL.md skills.
What this skill can do
Sends data to these websites: www.ebi.ac.uk
This is disclosed by the author in the skill's SKILL.md or README. Expected for a data skill.
Found in 34 places.
Show 17 more
- skills/gwas-database/SKILL.md, line 132
response = requests.get(url, headers={"Content-Type": "application/json"}) - skills/gwas-database/SKILL.md, line 147
response = requests.get(url, headers={"Content-Type": "application/json"}) - skills/gwas-database/SKILL.md, line 167
response = requests.get(url, headers={"Content-Type": "application/json"}) - skills/gwas-database/SKILL.md, line 173
response = requests.get(url, params=params, headers={"Content-Type": "application/json"}) - skills/gwas-database/SKILL.md, line 198
response = requests.get(url, params=params) - skills/gwas-database/SKILL.md, line 226
response = requests.get(url, params=params, headers={"Content-Type": "application/json"}) - skills/gwas-database/SKILL.md, line 253
response = requests.get(url) - skills/gwas-database/SKILL.md, line 285
response = requests.get("https://www.ebi.ac.uk/gwas/rest/api/studies/GCST001234") - skills/gwas-database/SKILL.md, line 290
associations_response = requests.get(associations_url) - skills/gwas-database/SKILL.md, line 508
response = requests.get(url, params=params, headers=headers) - skills/gwas-database/references/api_reference.md, line 63
response = requests.get(url) - skills/gwas-database/references/api_reference.md, line 103
response = requests.get(url, headers={"Content-Type": "application/json"}) - skills/gwas-database/references/api_reference.md, line 155
response = requests.get(url, params=params, headers={"Content-Type": "application/json"}) - skills/gwas-database/references/api_reference.md, line 199
response = requests.get(url, headers={"Content-Type": "application/json"}) - skills/gwas-database/references/api_reference.md, line 237
response = requests.get(url, headers={"Content-Type": "application/json"}) - skills/gwas-database/references/api_reference.md, line 278
response = requests.get(url, params=params, headers={"Content-Type": "application/json"}) - skills/gwas-database/references/api_reference.md, line 303
response = requests.get("https://www.ebi.ac.uk/gwas/rest/api/studies/GCST001795")
and 14 more places
Runs commands on your computer
The author does not mention this.
Found in 1 place.
Downloads and installs other software
The author does not mention this.
Found in 1 place.
Safer alternatives
Low-risk skills in the same category (data) that look related. Check that one does what you need.
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'gwas-database' ] || [ -L ~/.agents/skills/'gwas-database' ]; then echo 'A skill folder named gwas-database already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lamm-mit/scienceclaw' "$d" && git -C "$d" checkout --quiet '894598cd3a90891a077c254566276bd379038bad' -- 'skills/gwas-database' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/gwas-database' ~/.agents/skills/'gwas-database' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'gwas-database' ~/.claude/skills/'gwas-database' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
The badge for lamm-mit/scienceclaw shows the score of its lowest-scoring skill.
[](https://zalavijaysinh.github.io/skilltrust/repos/lamm-mit/scienceclaw/)
Score history
| Date | Version | Score |
|---|
| 2026-11-13 | 894598c | 77 |