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clinpgx-database
75 / 100 · Review before installing
Check before installing. Some of what it can do is expected: a data skill usually connects to databases or online services with your credentials.
By lamm-mit/scienceclaw (GitHub) · data · 251 stars · scanned at commit 894598c
Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
Works with any agent that supports SKILL.md skills.
What this skill can do
Downloads and installs other software
The author does not mention this.
Found in 2 places.
Runs commands on your computer
The author does not mention this.
Found in 1 place.
Sends data to these websites: api.clinpgx.org
The author does not mention this. Expected for a data skill.
Found in 62 places.
Show 17 more
- skills/clinpgx-database/SKILL.md, line 92
response = requests.get("https://api.clinpgx.org/v1/chemical", - skills/clinpgx-database/SKILL.md, line 112
response = requests.get("https://api.clinpgx.org/v1/geneDrugPair", - skills/clinpgx-database/SKILL.md, line 117
response = requests.get("https://api.clinpgx.org/v1/geneDrugPair", - skills/clinpgx-database/SKILL.md, line 134
response = requests.get("https://api.clinpgx.org/v1/guideline/PA166104939") - skills/clinpgx-database/SKILL.md, line 138
response = requests.get("https://api.clinpgx.org/v1/guideline", - skills/clinpgx-database/SKILL.md, line 164
response = requests.get("https://api.clinpgx.org/v1/allele/CYP2D6*4") - skills/clinpgx-database/SKILL.md, line 168
response = requests.get("https://api.clinpgx.org/v1/allele", - skills/clinpgx-database/SKILL.md, line 192
response = requests.get("https://api.clinpgx.org/v1/variant/rs4244285") - skills/clinpgx-database/SKILL.md, line 196
response = requests.get("https://api.clinpgx.org/v1/variant", - skills/clinpgx-database/SKILL.md, line 215
response = requests.get("https://api.clinpgx.org/v1/clinicalAnnotation", - skills/clinpgx-database/SKILL.md, line 220
response = requests.get("https://api.clinpgx.org/v1/clinicalAnnotation", - skills/clinpgx-database/SKILL.md, line 239
response = requests.get("https://api.clinpgx.org/v1/drugLabel", - skills/clinpgx-database/SKILL.md, line 244
response = requests.get("https://api.clinpgx.org/v1/drugLabel", - skills/clinpgx-database/SKILL.md, line 262
response = requests.get("https://api.clinpgx.org/v1/pathway/PA146123006") # Warfarin pathway - skills/clinpgx-database/SKILL.md, line 266
response = requests.get("https://api.clinpgx.org/v1/pathway", - skills/clinpgx-database/SKILL.md, line 285
response = requests.get("https://api.clinpgx.org/v1/allele/CYP2C19*2") - skills/clinpgx-database/SKILL.md, line 291
response = requests.get("https://api.clinpgx.org/v1/geneDrugPair",
and 42 more places
Safer alternatives
Low-risk skills in the same category (data) that look related. Check that one does what you need.
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'clinpgx-database' ] || [ -L ~/.agents/skills/'clinpgx-database' ]; then echo 'A skill folder named clinpgx-database already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/lamm-mit/scienceclaw' "$d" && git -C "$d" checkout --quiet '894598cd3a90891a077c254566276bd379038bad' -- 'skills/clinpgx-database' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/clinpgx-database' ~/.agents/skills/'clinpgx-database' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'clinpgx-database' ~/.claude/skills/'clinpgx-database' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
The badge for lamm-mit/scienceclaw shows the score of its lowest-scoring skill.

[](https://zalavijaysinh.github.io/skilltrust/repos/lamm-mit/scienceclaw/)
Score history
| Date | Version | Score |
|---|
| 2026-11-13 | 894598c | 75 |