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scanpy

95 / 100 · Low risk

Fine to try.

By iradoweck/antigravity-awesome-skills (GitHub) · data · 30 stars · scanned at commit 2984de1

Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality control, normalization, dimensionality reduction, clustering, marker gene identification, visualization, and trajectory analysis.

Works with any agent that supports SKILL.md skills.

What this skill can do

Runs commands on your computer

The author does not mention this.

Found in 3 places.

Other copies in this repository

iradoweck/antigravity-awesome-skills has 2 more folders with a skill named scanpy. This page shows the lowest-scoring copy.

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'scanpy' ] || [ -L ~/.agents/skills/'scanpy' ]; then echo 'A skill folder named scanpy already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/iradoweck/antigravity-awesome-skills' "$d" && git -C "$d" checkout --quiet '2984de11956e413008c6f98121cd141c499e47a3' -- 'skills/scanpy' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/scanpy' ~/.agents/skills/'scanpy' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'scanpy' ~/.claude/skills/'scanpy' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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Score history

DateVersionScore
2026-11-082984de195
2026-11-062984de195