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hpc-runtime-doctor

95 / 100 · Low risk

Fine to try.

By HeshamFS/materials-simulation-skills (GitHub) · design · 83 stars · scanned at commit 7750559

Diagnose HPC runtime and scheduler problems for materials simulations, including MPI/OpenMP/GPU layout, modules, CUDA/Kokkos hints, scratch paths, walltime, job arrays, restart strategy, scheduler portability, and resource mismatch. Use when an ALREADY-SUBMITTED job failed, ran slowly, got killed, or behaved differently on a cluster than on a workstation. To author or vet a NEW submission script before running, use slurm-job-script-generator instead.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'hpc-runtime-doctor' ] || [ -L ~/.agents/skills/'hpc-runtime-doctor' ]; then echo 'A skill folder named hpc-runtime-doctor already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/HeshamFS/materials-simulation-skills' "$d" && git -C "$d" checkout --quiet '775055956bb8fa3838032c49a346e26d94d0d1f6' -- 'skills/hpc-deployment/hpc-runtime-doctor' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/hpc-deployment/hpc-runtime-doctor' ~/.agents/skills/'hpc-runtime-doctor' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'hpc-runtime-doctor' ~/.claude/skills/'hpc-runtime-doctor' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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