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alphafold-database-fetch-and-analyze

95 / 100 · Low risk

Fine to try.

By franklee16/academic-research-skills (GitHub) · data · 234 stars · scanned at commit 9a4b2db

Retrieve and analyze AlphaFold predicted structures for a protein. Use when the user provides a specific UniProt Accession ID and wants structural confidence metrics (pLDDT), domain boundary analysis, or disorder assessment. Do not use if the user only has a protein name, gene name, or amino acid sequence — ask for a UniProt ID first.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'alphafold-database-fetch-and-analyze' ] || [ -L ~/.agents/skills/'alphafold-database-fetch-and-analyze' ]; then echo 'A skill folder named alphafold-database-fetch-and-analyze already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/franklee16/academic-research-skills' "$d" && git -C "$d" checkout --quiet '9a4b2db21fc4b217136ae4a0e6faad42d179ca03' -- 'science-skills/alphafold_database_fetch_and_analyze' && mkdir -p ~/.agents/skills && cp -R "$d"/'science-skills/alphafold_database_fetch_and_analyze' ~/.agents/skills/'alphafold-database-fetch-and-analyze' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'alphafold-database-fetch-and-analyze' ~/.claude/skills/'alphafold-database-fetch-and-analyze' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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