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bio-methylation-calling

80 / 100 · Low risk

Fine to try. Some of what it can do is expected: a data skill usually connects to databases or online services with your credentials.

By diegosouzapw/awesome-omni-skill (GitHub) · data · 66 stars · scanned at commit a6b3c30

Extract methylation calls from Bismark BAM files using bismark_methylation_extractor. Generates per-cytosine reports for CpG, CHG, and CHH contexts. Use when extracting methylation levels from aligned bisulfite sequencing data for downstream analysis.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-methylation-calling' ] || [ -L ~/.agents/skills/'bio-methylation-calling' ]; then echo 'A skill folder named bio-methylation-calling already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/diegosouzapw/awesome-omni-skill' "$d" && git -C "$d" checkout --quiet 'a6b3c3005cedf056a48b084671c6282426d6e9fc' -- 'skills/data-ai/bio-methylation-calling' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/data-ai/bio-methylation-calling' ~/.agents/skills/'bio-methylation-calling' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-methylation-calling' ~/.claude/skills/'bio-methylation-calling' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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