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bio-basecalling

80 / 100 · Low risk

Fine to try. Some of what it can do is expected: a data skill usually connects to databases or online services with your credentials.

By diegosouzapw/awesome-omni-skill (GitHub) · data · 66 stars · scanned at commit a6b3c30

Convert raw Nanopore signal data (FAST5/POD5) to nucleotide sequences using Dorado basecaller. Covers model selection, GPU acceleration, modified base detection, and quality filtering. Use when processing raw Nanopore data before alignment. Note: Guppy is deprecated; use Dorado for all new analyses.

Works with any agent that supports SKILL.md skills.

What this skill can do

Other copies in this repository

diegosouzapw/awesome-omni-skill has 1 more folder with a skill named bio-basecalling. This page shows the lowest-scoring copy.

• skills/data-ai/bio-basecalling-majiayu000 80/100 · Low risk

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'bio-basecalling' ] || [ -L ~/.agents/skills/'bio-basecalling' ]; then echo 'A skill folder named bio-basecalling already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/diegosouzapw/awesome-omni-skill' "$d" && git -C "$d" checkout --quiet 'a6b3c3005cedf056a48b084671c6282426d6e9fc' -- 'skills/data-ai/bio-basecalling' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/data-ai/bio-basecalling' ~/.agents/skills/'bio-basecalling' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-basecalling' ~/.claude/skills/'bio-basecalling' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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