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pdb-structure-api

90 / 100 · Low risk

Fine to try. Some of what it can do is expected: a research skill usually looks things up on the internet.

By brycewang-stanford/Auto-Empirical-Research-Skills (GitHub) · research · 5,016 stars · scanned at commit 8684584

Search and retrieve 3D protein structures from the RCSB Protein Data Bank

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'pdb-structure-api' ] || [ -L ~/.agents/skills/'pdb-structure-api' ]; then echo 'A skill folder named pdb-structure-api already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills' "$d" && git -C "$d" checkout --quiet '8684584e7d1127940f018157d2c579974fae8f79' -- 'skills/43-wentorai-research-plugins/skills/domains/biomedical/pdb-structure-api' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/43-wentorai-research-plugins/skills/domains/biomedical/pdb-structure-api' ~/.agents/skills/'pdb-structure-api' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'pdb-structure-api' ~/.claude/skills/'pdb-structure-api' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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