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neuropixels-analysis

67 / 100 · Review before installing

Check before installing. Some of what it can do is expected: a data skill usually connects to databases or online services with your credentials.

By boisenoise/skills-collections (GitHub) · data · 12 stars · scanned at commit 419c39f

Analyzes Neuropixels extracellular recordings end-to-end with SpikeInterface. Covers loading SpikeGLX/Open Ephys/NWB data, preprocessing, drift/motion correction, Kilosort4 (and CPU) spike sorting, quality metrics, and unit curation (threshold-based, model-based UnitRefine, and AI-assisted visual review). Use when working with Neuropixels 1.0/2.0 recordings, spike sorting, or extracellular electrophysiology analysis.

Works with any agent that supports SKILL.md skills.

What this skill can do

Safer alternatives

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Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'neuropixels-analysis' ] || [ -L ~/.agents/skills/'neuropixels-analysis' ]; then echo 'A skill folder named neuropixels-analysis already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/boisenoise/skills-collections' "$d" && git -C "$d" checkout --quiet '419c39fde874b8baecbb36a397b967e0190a2ece' -- 'skills/kdense-neuropixels-analysis' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/kdense-neuropixels-analysis' ~/.agents/skills/'neuropixels-analysis' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'neuropixels-analysis' ~/.claude/skills/'neuropixels-analysis' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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Score history

Also found in

Identical copies of this skill exist at:

• LeoYeAI/agent-master-skills/skills/neuropixels-analysis
• stanfish06/skillquarium/skills/neuropixels-analysis