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etetoolkit

77 / 100 · Review before installing

Check before installing.

By boisenoise/skills-collections (GitHub) · other · 12 stars · scanned at commit 419c39f

Analyzes, manipulates, compares, annotates, and visualizes phylogenetic or other hierarchical trees with ETE 4. Supports Newick/Nexus tree I/O, topology edits and pattern matching, Robinson-Foulds comparisons, gene-tree evolutionary events and reconciliation, NCBI/GTDB taxonomy, SmartView exploration, and publication rendering. Applies to existing trees after alignment and phylogenetic inference, rather than inferring trees from raw sequences.

Works with any agent that supports SKILL.md skills.

What this skill can do

Downloads and installs other software

The author does not mention this.

Found in 15 places.

Show 12 more

Runs commands on your computer

The author does not mention this.

Found in 5 places.

Show 2 more

Connects to the internet

This is disclosed by the author in the skill's SKILL.md or README.

Found in 1 place.

Safer alternatives

Low-risk skills in the same category (other) that look related. Check that one does what you need.

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'etetoolkit' ] || [ -L ~/.agents/skills/'etetoolkit' ]; then echo 'A skill folder named etetoolkit already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/boisenoise/skills-collections' "$d" && git -C "$d" checkout --quiet '419c39fde874b8baecbb36a397b967e0190a2ece' -- 'skills/kdense-etetoolkit' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/kdense-etetoolkit' ~/.agents/skills/'etetoolkit' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'etetoolkit' ~/.claude/skills/'etetoolkit' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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Score history

DateVersionScore
2026-11-12419c39f77
2026-11-085fe45e577
2026-11-06b89b2f577

Also found in

Identical copies of this skill exist at: