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uniprot-protein-database
75 / 100 · Review before installing
Check before installing. Some of what it can do is expected: a coding skill usually runs build and test commands.
By BioTender-max/awesome-bio-agent-skills (GitHub) · coding · 219 stars · scanned at commit 8cbdd18
Query UniProt REST API: search by gene/protein name, fetch FASTA, map IDs (Ensembl, PDB, RefSeq), access Swiss-Prot annotations. Use bioservices for multi-DB access; alphafold-database for structures.
Works with any agent that supports SKILL.md skills.
What this skill can do
Downloads and installs other software
The author does not mention this.
Found in 1 place.
Runs commands on your computer
The author does not mention this. Expected for a coding skill.
Found in 1 place.
Sends data to these websites: rest.uniprot.org
The author does not mention this.
Found in 15 places.
Show 12 more
- skills/sciagent/uniprot-protein-database/SKILL.md, line 118
fasta = requests.get("https://rest.uniprot.org/uniprotkb/P01308.fasta").text - skills/sciagent/uniprot-protein-database/SKILL.md, line 133
resp = requests.post("https://rest.uniprot.org/idmapping/run", - skills/sciagent/uniprot-protein-database/SKILL.md, line 140
status = requests.get(f"https://rest.uniprot.org/idmapping/status/{job_id}").json() - skills/sciagent/uniprot-protein-database/SKILL.md, line 146
results = requests.get(f"https://rest.uniprot.org/idmapping/results/{job_id}").json() - skills/sciagent/uniprot-protein-database/SKILL.md, line 176
resp = requests.get("https://rest.uniprot.org/uniprotkb/search", params=params) - skills/sciagent/uniprot-protein-database/SKILL.md, line 189
resp = requests.get(url, stream=True) - skills/sciagent/uniprot-protein-database/SKILL.md, line 215
resp = requests.get(url, params=params) - skills/sciagent/uniprot-protein-database/SKILL.md, line 251
resp = requests.get("https://rest.uniprot.org/uniprotkb/search", params=params) - skills/sciagent/uniprot-protein-database/SKILL.md, line 305
resp = requests.get(url, params=params) - skills/sciagent/uniprot-protein-database/SKILL.md, line 327
resp = requests.get("https://rest.uniprot.org/uniprotkb/search", params=params) - skills/sciagent/uniprot-protein-database/SKILL.md, line 339
resp = requests.post("https://rest.uniprot.org/idmapping/run", - skills/sciagent/uniprot-protein-database/SKILL.md, line 343
results = requests.get(f"https://rest.uniprot.org/idmapping/results/{job_id}").json()
Safer alternatives
Low-risk skills in the same category (coding) that look related. Check that one does what you need.
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'uniprot-protein-database' ] || [ -L ~/.agents/skills/'uniprot-protein-database' ]; then echo 'A skill folder named uniprot-protein-database already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/BioTender-max/awesome-bio-agent-skills' "$d" && git -C "$d" checkout --quiet '8cbdd18837aa6296c4e77616a03b323bd69b57b1' -- 'skills/sciagent/uniprot-protein-database' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/sciagent/uniprot-protein-database' ~/.agents/skills/'uniprot-protein-database' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'uniprot-protein-database' ~/.claude/skills/'uniprot-protein-database' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
The badge for BioTender-max/awesome-bio-agent-skills shows the score of its lowest-scoring skill.
[](https://zalavijaysinh.github.io/skilltrust/repos/BioTender-max/awesome-bio-agent-skills/)
Score history
| Date | Version | Score |
|---|
| 2026-11-07 | 8cbdd18 | 75 |