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harmonization-tool

97 / 100 · Low risk

Fine to try.

By BioTender-max/awesome-bio-agent-skills (GitHub) · design · 219 stars · scanned at commit 8cbdd18

Use this skill whenever the user wants to remove site/scanner/batch effects from neuroimaging features before running downstream models, run mega-analysis across multiple datasets, or evaluate models with leave-site-out / site-stratified protocols. Triggers include: 'harmonize', 'ComBat', 'CovBat', 'site effect', 'scanner effect', 'batch effect', 'leave-site-out', 'mega-analysis', 'multi-site', 'cross-site', 'neuroHarmonize'. This is a horizontal cross-cutting layer between dataset skills and m…

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'harmonization-tool' ] || [ -L ~/.agents/skills/'harmonization-tool' ]; then echo 'A skill folder named harmonization-tool already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/BioTender-max/awesome-bio-agent-skills' "$d" && git -C "$d" checkout --quiet '8cbdd18837aa6296c4e77616a03b323bd69b57b1' -- 'skills/neuroclaw/harmonization-tool' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/neuroclaw/harmonization-tool' ~/.agents/skills/'harmonization-tool' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'harmonization-tool' ~/.claude/skills/'harmonization-tool' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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