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pdb-database

75 / 100 · Review before installing

Check before installing.

By BioTender-max/awesome-bio-agent-skills (GitHub) · design · 219 stars · scanned at commit 8cbdd18

Access RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates (PDB/mmCIF), retrieve metadata, for structural biology and drug discovery.

Works with any agent that supports SKILL.md skills.

What this skill can do

Connects to the internet

The author does not mention this.

Found in 7 places.

Show 4 more

Downloads and installs other software

The author does not mention this.

Found in 2 places.

Runs commands on your computer

The author does not mention this.

Found in 1 place.

Safer alternatives

Low-risk skills in the same category (design) that look related. Check that one does what you need.

Other copies in this repository

BioTender-max/awesome-bio-agent-skills has 1 more folder with a skill named pdb-database. This page shows the lowest-scoring copy.

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'pdb-database' ] || [ -L ~/.agents/skills/'pdb-database' ]; then echo 'A skill folder named pdb-database already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/BioTender-max/awesome-bio-agent-skills' "$d" && git -C "$d" checkout --quiet '8cbdd18837aa6296c4e77616a03b323bd69b57b1' -- 'skills/labclaw/pdb-database' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/labclaw/pdb-database' ~/.agents/skills/'pdb-database' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'pdb-database' ~/.claude/skills/'pdb-database' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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Score history

DateVersionScore
2026-11-078cbdd1875