bio-microbiome-differential-abundance
100 / 100 · Low risk
Fine to try.
Differential abundance testing for microbiome data using compositionally-aware methods like ALDEx2, ANCOM-BC2, and MaAsLin2. Use when identifying taxa that differ between experimental groups while accounting for the compositional nature of microbiome data.
What this skill can do
We found nothing in the files we read that matches our rules. That does not prove the skill is safe: see the limits of static scanning.
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'bio-microbiome-differential-abundance' ] || [ -L ~/.agents/skills/'bio-microbiome-differential-abundance' ]; then echo 'A skill folder named bio-microbiome-differential-abundance already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/BioTender-max/awesome-bio-agent-skills' "$d" && git -C "$d" checkout --quiet '8cbdd18837aa6296c4e77616a03b323bd69b57b1' -- 'skills/bioskills/differential-abundance' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/bioskills/differential-abundance' ~/.agents/skills/'bio-microbiome-differential-abundance' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'bio-microbiome-differential-abundance' ~/.claude/skills/'bio-microbiome-differential-abundance' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
[](https://zalavijaysinh.github.io/skilltrust/repos/BioTender-max/awesome-bio-agent-skills/)
Score history
| Date | Version | Score |
|---|---|---|
| 2026-11-07 | 8cbdd18 | 100 |
Also found in
- BioTender-max/awesome-bio-agent-skills/skills/bioskills/microbiome__differential-abundance