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anndata
55 / 100 · Review before installing
Check before installing. Some of what it can do is expected: a coding skill usually runs build and test commands.
By anubhavg-icpl/vibe (GitHub) · coding · 13 stars · scanned at commit d51e7ac
Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.
Works with any agent that supports SKILL.md skills.
What this skill can do
Downloads and installs other software
The author does not mention this. It runs automatically when the plugin is installed.
Found in 12 places.
Show 9 more
- .claude/settings.json, line 167
"Bash(npx claude-flow*)", - .mcp.json, line 4
"command": "npx", - hooks/cmods/README.md, line 96
npx eslint --fix "$FILE" 2>/dev/null - hooks/cmods/post-edit-format.sh, line 29
npx prettier --write "$FILE" 2>/dev/null && FORMATTED=true - hooks/cmods/post-edit-format.sh, line 32
npx biome format --write "$FILE" 2>/dev/null && FORMATTED=true - hooks/cmods/post-edit-format.sh, line 80
npx prettier --write "$FILE" 2>/dev/null && FORMATTED=true - hooks/cmods/post-edit-format.sh, line 86
npx prettier --write "$FILE" 2>/dev/null && FORMATTED=true - hooks/cmods/pre-commit-lint.sh, line 38
echo "$files" | xargs npx eslint --max-warnings 0 2>/dev/null - hooks/hooks.json, line 106
"command": "#!/bin/bash\n# Run TypeScript check after editing TS files\ninput=$(cat)\nfile_path=$(echo \"$input\" | jq -r '.tool_input.file_path // \"\"')\n\nif
Runs commands on your computer
The author does not mention this. It runs automatically when the plugin is installed. Expected for a coding skill.
Found in 63 places.
Show 17 more
- .claude/settings.json, line 31
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" post-edit'", - .claude/settings.json, line 41
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" post-bash'", - .claude/settings.json, line 52
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" route'", - .claude/settings.json, line 63
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" session-restore'", - .claude/settings.json, line 68
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/auto-memory-hook.mjs\" import'", - .claude/settings.json, line 79
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" session-end'", - .claude/settings.json, line 90
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/auto-memory-hook.mjs\" sync'", - .claude/settings.json, line 102
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" compact-manual'" - .claude/settings.json, line 106
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" session-end'", - .claude/settings.json, line 116
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" compact-auto'" - .claude/settings.json, line 120
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" session-end'", - .claude/settings.json, line 131
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" status'", - .claude/settings.json, line 142
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" post-task'", - .claude/settings.json, line 153
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/hook-handler.cjs\" notify'", - .claude/settings.json, line 162
"command": "sh -c 'exec node \"${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/statusline.cjs\"'" - .mcp.json, line 4
"command": "npx", - hooks/cmods/README.md, line 64
"os.system("
and 43 more places
Connects to the internet
The author does not mention this.
Found in 2 places.
Reads your saved credentials, such as SSH keys or .env files
The author does not mention this. It runs automatically when the plugin is installed.
Found in 1 place.
Safer alternatives
Low-risk skills in the same category (coding) that look related. Check that one does what you need.
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'anndata' ] || [ -L ~/.agents/skills/'anndata' ]; then echo 'A skill folder named anndata already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/anubhavg-icpl/vibe' "$d" && git -C "$d" checkout --quiet 'd51e7ac9a34111cd2e63daed83c2198f91570050' -- 'skills/sci-anndata' && mkdir -p ~/.agents/skills && cp -R "$d"/'skills/sci-anndata' ~/.agents/skills/'anndata' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'anndata' ~/.claude/skills/'anndata' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
The badge for anubhavg-icpl/vibe shows the score of its lowest-scoring skill.
[](https://zalavijaysinh.github.io/skilltrust/repos/anubhavg-icpl/vibe/)
Score history
| Date | Version | Score |
|---|
| 2026-11-08 | d51e7ac | 55 |