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wgcna-analysis

95 / 100 · Low risk

Fine to try. Some of what it can do is expected: a coding skill usually runs build and test commands.

By aipoch/openscience-specialist-marketplace (GitHub) · coding · 10 stars · scanned at commit 88ca6e1

Use when building a weighted gene co-expression network from a bulk expression matrix and a sample group file, filtering variable genes by MAD, identifying co-expression modules with WGCNA, correlating modules with traits, and exporting module-level plots and gene tables. NOT for single-cell RNA-seq, differential expression testing, methylation analysis, or datasets that are too small for WGCNA after quality control.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'wgcna-analysis' ] || [ -L ~/.agents/skills/'wgcna-analysis' ]; then echo 'A skill folder named wgcna-analysis already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/aipoch/openscience-specialist-marketplace' "$d" && git -C "$d" checkout --quiet '88ca6e1772cb97189d56ad68346cc86268116f6b' -- 'specialists/auto-research-specialist/versions/1.0.1/package/skills/wgcna-analysis' && mkdir -p ~/.agents/skills && cp -R "$d"/'specialists/auto-research-specialist/versions/1.0.1/package/skills/wgcna-analysis' ~/.agents/skills/'wgcna-analysis' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'wgcna-analysis' ~/.claude/skills/'wgcna-analysis' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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