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fair-esm2

85 / 100 · Low risk

Fine to try.

By aipoch/open-science (GitHub) · research · 5,526 stars · scanned at commit c4ae79b

Embed proteins with Meta AI's ESM-2 (`fair-esm` package). Use this skill when: (1) Extracting per-residue or per-sequence embeddings for downstream ML, (2) Masked-LM likelihood / mutation effect scoring, (3) Contact prediction from a sequence.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'fair-esm2' ] || [ -L ~/.agents/skills/'fair-esm2' ]; then echo 'A skill folder named fair-esm2 already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/aipoch/open-science' "$d" && git -C "$d" checkout --quiet 'c4ae79ba6ca5c97dcb1fb27518acda85319d7115' -- 'resources/skills/fair-esm2' && mkdir -p ~/.agents/skills && cp -R "$d"/'resources/skills/fair-esm2' ~/.agents/skills/'fair-esm2' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'fair-esm2' ~/.claude/skills/'fair-esm2' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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