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sciagent-lamindb-data-management

85 / 100 · Low risk

Fine to try.

By ai4nucleome/BioMaster (GitHub) · data · 118 stars · scanned at commit 6f98a63

Open-source FAIR biology data framework. Version artifacts (AnnData, DataFrame, Zarr), track lineage, validate via ontologies (Bionty), query datasets. Integrates with Nextflow, Snakemake, W&B, scVI. For scRNA-seq use scanpy; for ontology lookups use bionty.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'sciagent-lamindb-data-management' ] || [ -L ~/.agents/skills/'sciagent-lamindb-data-management' ]; then echo 'A skill folder named sciagent-lamindb-data-management already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/ai4nucleome/BioMaster' "$d" && git -C "$d" checkout --quiet '6f98a63aa1823304403475b1929424ccf9d4ec46' -- '.opencode/bioskills/sciagent-lamindb-data-management' && mkdir -p ~/.agents/skills && cp -R "$d"/'.opencode/bioskills/sciagent-lamindb-data-management' ~/.agents/skills/'sciagent-lamindb-data-management' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'sciagent-lamindb-data-management' ~/.claude/skills/'sciagent-lamindb-data-management' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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Score history