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openclaw-fastq-analysis

85 / 100 · Low risk

Fine to try.

By ai4nucleome/BioMaster (GitHub) · other · 118 stars · scanned at commit 6f98a63

Guide through omicverse's alignment module for SRA downloading, FASTQ quality control, STAR alignment, gene quantification, and single-cell kallisto/bustools pipelines covering both bulk and single-cell RNA-seq workflows.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'openclaw-fastq-analysis' ] || [ -L ~/.agents/skills/'openclaw-fastq-analysis' ]; then echo 'A skill folder named openclaw-fastq-analysis already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/ai4nucleome/BioMaster' "$d" && git -C "$d" checkout --quiet '6f98a63aa1823304403475b1929424ccf9d4ec46' -- '.opencode/bioskills/openclaw-fastq-analysis' && mkdir -p ~/.agents/skills && cp -R "$d"/'.opencode/bioskills/openclaw-fastq-analysis' ~/.agents/skills/'openclaw-fastq-analysis' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'openclaw-fastq-analysis' ~/.claude/skills/'openclaw-fastq-analysis' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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