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omicsclaw-bulk-omics-clustering
85 / 100 · Low risk
Fine to try.
By ai4nucleome/BioMaster (GitHub) · data · 118 stars · scanned at commit 6f98a63
Cluster samples or features from bulk transcriptomics, proteomics, or metabolomics data.
Works with any agent that supports SKILL.md skills.
What this skill can do
Downloads and installs other software
The author does not mention this.
Found in 14 places.
Show 11 more
- .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 83
| scikit-learn | ≥1.0 | BSD-3-Clause | ✅ Permitted | `pip install scikit-learn` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 84
| scipy | ≥1.7 | BSD-3-Clause | ✅ Permitted | `pip install scipy` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 85
| hdbscan | ≥0.8.28 | BSD-3-Clause | ✅ Permitted | `pip install hdbscan` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 86
| umap-learn | ≥0.5 | BSD-3-Clause | ✅ Permitted | `pip install umap-learn` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 87
| plotnine | ≥0.10 | MIT | ✅ Permitted | `pip install plotnine` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 88
| plotnine-prism | Latest | MIT | ✅ Permitted | `pip install plotnine-prism` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 89
| seaborn | ≥0.11 | BSD-3-Clause | ✅ Permitted | `pip install seaborn` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 90
| matplotlib | ≥3.4 | PSF-based | ✅ Permitted | `pip install matplotlib` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 91
| adjustText | ≥0.8 | MIT | ✅ Permitted | `pip install adjustText` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 92
| statsmodels | ≥0.13 | BSD-3-Clause | ✅ Permitted | `pip install statsmodels` | - .opencode/bioskills/omicsclaw-bulk-omics-clustering/macro.md, line 401
| `ModuleNotFoundError: No module named 'plotnine_prism'` | Missing optional visualization dependency | Install: `pip install plotnine-prism` |
Install
Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.
if [ -e ~/.agents/skills/'omicsclaw-bulk-omics-clustering' ] || [ -L ~/.agents/skills/'omicsclaw-bulk-omics-clustering' ]; then echo 'A skill folder named omicsclaw-bulk-omics-clustering already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/ai4nucleome/BioMaster' "$d" && git -C "$d" checkout --quiet '6f98a63aa1823304403475b1929424ccf9d4ec46' -- '.opencode/bioskills/omicsclaw-bulk-omics-clustering' && mkdir -p ~/.agents/skills && cp -R "$d"/'.opencode/bioskills/omicsclaw-bulk-omics-clustering' ~/.agents/skills/'omicsclaw-bulk-omics-clustering' && rm -rf "$d"; fi
Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'omicsclaw-bulk-omics-clustering' ~/.claude/skills/'omicsclaw-bulk-omics-clustering' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.
Badge for your README
The badge for ai4nucleome/BioMaster shows the score of its lowest-scoring skill.

[](https://zalavijaysinh.github.io/skilltrust/repos/ai4nucleome/BioMaster/)
Score history
| Date | Version | Score |
|---|
| 2026-11-08 | 6f98a63 | 100 |