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kdense-scvi-tools

85 / 100 · Low risk

Fine to try.

By ai4nucleome/BioMaster (GitHub) · data · 118 stars · scanned at commit 6f98a63

Deep generative models for single-cell omics. Use when you need probabilistic batch correction (scVI), transfer learning, differential expression with uncertainty, or multi-modal integration (TOTALVI, MultiVI). Best for advanced modeling, batch effects, multimodal data. For standard analysis pipelines use scanpy.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'kdense-scvi-tools' ] || [ -L ~/.agents/skills/'kdense-scvi-tools' ]; then echo 'A skill folder named kdense-scvi-tools already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/ai4nucleome/BioMaster' "$d" && git -C "$d" checkout --quiet '6f98a63aa1823304403475b1929424ccf9d4ec46' -- '.opencode/bioskills/kdense-scvi-tools' && mkdir -p ~/.agents/skills && cp -R "$d"/'.opencode/bioskills/kdense-scvi-tools' ~/.agents/skills/'kdense-scvi-tools' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'kdense-scvi-tools' ~/.claude/skills/'kdense-scvi-tools' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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