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kdense-scvelo

85 / 100 · Low risk

Fine to try.

By ai4nucleome/BioMaster (GitHub) · data · 118 stars · scanned at commit 6f98a63

RNA velocity analysis with scVelo. Estimate cell state transitions from unspliced/spliced mRNA dynamics, infer trajectory directions, compute latent time, and identify driver genes in single-cell RNA-seq data. Complements Scanpy/scVI-tools for trajectory inference.

Works with any agent that supports SKILL.md skills.

What this skill can do

Install

Paste this into your terminal. It downloads exactly the version we scanned, not whatever is newest.

if [ -e ~/.agents/skills/'kdense-scvelo' ] || [ -L ~/.agents/skills/'kdense-scvelo' ]; then echo 'A skill folder named kdense-scvelo already exists — not replacing it' >&2; false; else d=$(mktemp -d) && git clone --quiet --filter=blob:none --no-checkout 'https://github.com/ai4nucleome/BioMaster' "$d" && git -C "$d" checkout --quiet '6f98a63aa1823304403475b1929424ccf9d4ec46' -- '.opencode/bioskills/kdense-scvelo' && mkdir -p ~/.agents/skills && cp -R "$d"/'.opencode/bioskills/kdense-scvelo' ~/.agents/skills/'kdense-scvelo' && rm -rf "$d"; fi

Codex reads ~/.agents/skills directly. For Claude Code, Cursor, Copilot, Gemini CLI, Antigravity or OpenCode, also link it. For Claude Code: ln -s ~/.agents/skills/'kdense-scvelo' ~/.claude/skills/'kdense-scvelo' (other agents: ~/.cursor/skills, ~/.copilot/skills, ~/.gemini/skills, ~/.gemini/config/skills, ~/.config/opencode/skills). Or install through the finder skill, which does both.

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